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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs75569001 chr4:72140399 G/A PRAMEF16 chr1:13495254-13498260:+ 0.54 7.99 1.34E-10 Box Plot
ACC rs75570942 chr2:4101667 C/T GAGE2D chrX:49207160-49214420:+ 0.69 8.35 3.54E-11 Box Plot
ACC rs75583629 chr8:134443112 C/T PRHOXNB chr13:28552243-28562774:- 0.64 7.8 2.61E-10 Box Plot
ACC rs75634401 chr11:126712126 A/G PRHOXNB chr13:28552243-28562774:- 0.74 9.87 1.62E-13 Box Plot
ACC rs7568300 chr2:67814401 C/A PRHOXNB chr13:28552243-28562774:- 0.66 9.64 3.66E-13 Box Plot
ACC rs75733613 chr20:60979902 A/G PRAMEF16 chr1:13495254-13498260:+ 0.61 7.81 2.52E-10 Box Plot
ACC rs75811424 chr13:105326088 G/T PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs75817691 chr1:20852974 G/T PRAMEF6 chr1:12998302-13007406:- 0.77 8.08 9.35E-11 Box Plot
ACC rs75893234 chr2:124919181 C/T GC chr4:72607410-72669758:- 0.68 9.87 1.65E-13 Box Plot
ACC rs75939330 chr6:18769461 A/G PRHOXNB chr13:28552243-28562774:- 0.6 7.81 2.57E-10 Box Plot
ACC rs75940900 chr4:111006118 T/G CACNG5 chr17:64831235-64881603:+ 1.44 8.03 1.15E-10 Box Plot
ACC rs76056312 chr6:62268425 C/G PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs76070697 chr18:37085998 C/T PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs76087779 chr8:112855177 A/G KRT14 chr17:39738531-39743173:- 1.14 7.63 4.9E-10 Box Plot
ACC rs76087779 chr8:112855177 A/G KRT6C chr12:52862300-52867569:- 0.82 11.71 3.41E-16 Box Plot